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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
232
candidate regulatory elements
161
target gene predictions
123
chromatin state
105
accessible chromatin
52
gene expression
39
binding sites
29
histone modifications
23
eQTL
17
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
345
September, 2022
188
February, 2021
57
November, 2021
28
June, 2020
20
May, 2021
19
February, 2024
17
September, 2023
14
October, 2022
11
August, 2021
11
March, 2020
10
January, 2020
10
May, 2020
10
May, 2024
9
February, 2020
8
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
6
April, 2020
3
March, 2024
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
November, 2019
Available data
595
bed bed3+
116
bed bed9
68
tsv
64
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
805
Homo sapiens
Biosample type
320
tissue
307
primary cell
127
cell line
50
in vitro differentiated cells
1
stem cell
Organ
959
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
277
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
719
AMP
57
ENCODE
15
KPMP
6
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
727
hg19
215
GRCh38
2
hg18
organ_slims!
ovary
BIOSAMPLE
TYPE
805 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
tissue
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
spleen
15
8
6
2
1
1
1
adipose tissue
7
8
6
2
3
1
4
1
+ See 13 more…
primary cell
fibroblast
3
4
16
1
2
6
pericyte cell
3
10
1
10
osteoblast
2
2
1
5
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 48 more…
cell line
A549
21
19
18
1
2
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
WI38
5
1
1
+ See 15 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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