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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
228
candidate regulatory elements
223
gene expression
172
target gene predictions
170
accessible chromatin
123
chromatin state
65
differential activity
50
binding sites
34
variant allelic effects
29
histone modifications
4
eQTL
2
caQTL
Date released
354
September, 2022
256
February, 2021
155
September, 2023
110
November, 2021
55
February, 2024
30
June, 2020
23
August, 2021
15
November, 2022
14
January, 2020
14
May, 2020
13
May, 2021
11
February, 2023
10
October, 2022
9
February, 2020
8
April, 2020
6
March, 2020
4
August, 2017
4
March, 2023
3
March, 2024
2
January, 2021
2
May, 2022
1
January, 2022
1
July, 2020
Available data
687
bed bed3+
275
tsv
132
bigWig
119
bed bed9
78
txt
3
csv
2
bigBed bed9
1
bigBed narrowPeak
Organism
1100
Homo sapiens
Biosample type
726
primary cell
235
tissue
116
cell line
23
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
825
AMP
155
KPMP
110
ENCODE
8
LungMap
2
T1D
Genome assembly (visualization)
807
hg19
274
GRCh38
organ_slims!
pancreas
BIOSAMPLE
TYPE
1100 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
7
15
2
2
1
1
2
hepatocyte
1
13
3
8
1
1
2
4
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
2
1
1
endothelial cell of umbilical vein
6
4
2
5
2
1
+ See 137 more…
tissue
lung
33
1
17
16
1
left lung
26
13
13
right lung
22
11
1
11
pigmented layer of retina
20
upper lobe of left lung
7
3
1
3
1
1
+ See 13 more…
cell line
A549
21
19
1
18
2
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
WI38
5
1
1
NCI-H226 cell
1
1
1
1
+ See 11 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 3 more…
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