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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
252
candidate regulatory elements
176
target gene predictions
141
chromatin state
75
binding sites
67
accessible chromatin
37
gene expression
36
histone modifications
19
variant allelic effects
18
differential activity
9
Fine-mapped variants
9
eQTL
3
caQTL
Date released
390
September, 2022
205
February, 2021
46
February, 2024
35
September, 2023
27
October, 2022
25
June, 2020
19
January, 2020
18
May, 2020
15
November, 2021
13
March, 2020
11
May, 2021
6
April, 2020
5
February, 2020
4
August, 2017
4
February, 2023
4
January, 2022
4
March, 2023
3
August, 2021
3
November, 2019
2
March, 2024
2
October, 2019
1
May, 2019
Available data
630
bed bed3+
137
bed bed9
65
tsv
43
bigWig
8
bigBed bed9
2
txt
Organism
842
Homo sapiens
Biosample type
331
tissue
302
cell line
207
primary cell
2
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
786
AMP
35
KPMP
15
ENCODE
6
LungMap
Genome assembly (visualization)
778
hg19
233
GRCh38
BIOSAMPLE
TYPE
842 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
gene expression
histone modifications
variant allelic effects
differential activity
Fine-mapped variants
eQTL
caQTL
tissue
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
renal pelvis
19
9
9
2
1
coronary artery
3
3
3
3
1
2
3
2
1
+ See 12 more…
cell line
A549
21
19
18
2
1
1
K562
7
23
7
2
1
1
GM12878
2
8
2
2
1
1
IMR-90
2
2
1
2
1
1
GM06990
2
1
1
2
1
1
+ See 35 more…
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
endothelial cell of hepatic sinusoid
6
6
4
fibroblast of lung
6
4
4
2
dermis blood vessel endothelial cell
6
2
2
fibroblast of pulmonary artery
2
1
1
2
1
1
+ See 34 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
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