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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
258
gene expression
253
candidate regulatory elements
233
accessible chromatin
211
target gene predictions
138
chromatin state
92
differential activity
60
binding sites
38
histone modifications
27
variant allelic effects
4
eQTL
2
caQTL
Date released
400
September, 2022
300
February, 2021
155
September, 2023
128
November, 2021
76
February, 2024
38
March, 2023
38
May, 2021
36
June, 2020
23
August, 2021
22
January, 2021
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
11
October, 2022
9
February, 2020
8
April, 2020
7
March, 2020
6
August, 2018
5
October, 2019
4
August, 2017
3
March, 2024
3
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
827
bed bed3+
329
tsv
186
bigWig
133
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
1
bed bed9+
Organism
1316
Homo sapiens
Biosample type
836
primary cell
264
tissue
190
cell line
26
in vitro differentiated cells
Organ
934
epithelium
633
kidney
450
connective tissue
447
brain
370
musculature of body
311
lung
289
intestine
271
pancreas
251
vasculature
244
heart
234
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
193
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
107
eye
88
bone element
87
mammary gland
86
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
70
artery
64
penis
62
lymph node
61
ureter
50
gonad
48
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
21
lymphatic vessel
21
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1001
AMP
155
KPMP
128
ENCODE
22
T1D
8
LungMap
2
community
Genome assembly (visualization)
964
hg19
326
GRCh38
month_released!
May, 2020
BIOSAMPLE
TYPE
1316 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
13
1
8
3
1
1
4
1
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
foreskin keratinocyte
11
4
4
+ See 151 more…
tissue
lung
1
33
17
16
1
left lung
26
13
13
right lung
22
1
11
11
pigmented layer of retina
20
upper lobe of left lung
7
1
3
3
1
1
+ See 31 more…
cell line
A549
21
1
19
18
2
1
EndoC_BH1
8
8
1
3
IMR-90
2
1
2
1
2
1
PC-9
2
1
2
1
1
1
MG63
2
1
1
1
1
1
+ See 25 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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