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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
312
candidate regulatory elements
203
target gene predictions
194
chromatin state
83
accessible chromatin
58
histone modifications
45
Fine-mapped variants
41
gene expression
36
eQTL
30
binding sites
28
variant allelic effects
2
caQTL
Date released
498
September, 2022
228
February, 2021
54
March, 2020
41
January, 2020
32
June, 2020
30
May, 2020
29
February, 2020
22
January, 2022
19
May, 2021
19
November, 2021
10
October, 2022
8
August, 2021
7
August, 2017
7
February, 2024
6
April, 2019
5
May, 2019
4
November, 2019
3
April, 2020
3
February, 2023
3
September, 2023
2
March, 2024
2
October, 2019
Available data
721
bed bed3+
182
bed bed9
97
tsv
52
bigWig
16
bigBed bed9
Organism
1031
Homo sapiens
Biosample type
744
tissue
182
cell line
100
primary cell
5
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1010
AMP
19
ENCODE
3
LungMap
Genome assembly (visualization)
961
hg19
325
GRCh38
BIOSAMPLE
TYPE
1032 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
gene expression
eQTL
binding sites
variant allelic effects
caQTL
tissue
heart
37
20
21
5
1
3
1
2
brain
29
16
18
2
3
1
2
1
1
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
+ See 74 more…
cell line
A549
21
19
18
1
1
2
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
IMR-90
2
2
1
1
1
2
+ See 19 more…
primary cell
fibroblast of lung
6
4
4
2
fibroblast of cardiac tissue
3
4
3
2
choroid plexus epithelial cell
2
1
1
1
1
1
type II pneumocyte
2
4
1
astrocyte of the cerebellum
2
1
1
1
1
+ See 19 more…
in vitro differentiated cells
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
cardiac fibroblast
1
stem cell
undifferentiated ESC (H9 cell line)
1
See all biosamples
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