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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
224
candidate regulatory elements
194
target gene predictions
189
accessible chromatin
121
chromatin state
92
differential activity
50
binding sites
40
variant allelic effects
30
histone modifications
4
eQTL
2
caQTL
Date released
352
September, 2022
259
February, 2021
155
September, 2023
126
November, 2021
75
February, 2024
38
March, 2023
38
May, 2021
29
June, 2020
23
August, 2021
20
January, 2021
14
May, 2020
13
January, 2020
9
February, 2020
9
October, 2022
8
April, 2020
7
March, 2020
6
August, 2018
5
October, 2019
4
August, 2017
3
March, 2024
2
February, 2023
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
Available data
729
bed bed3+
325
tsv
160
bigWig
117
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1200
Homo sapiens
Biosample type
820
primary cell
221
tissue
139
cell line
20
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
889
AMP
155
KPMP
126
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
849
hg19
300
GRCh38
organ_slims!
eye
BIOSAMPLE
TYPE
1200 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
7
15
2
2
1
1
2
hepatocyte
13
1
3
8
1
1
2
4
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
6
4
2
5
2
1
+ See 145 more…
tissue
lung
1
33
17
16
1
left lung
26
13
13
right lung
22
11
1
11
upper lobe of left lung
7
3
1
3
1
1
breast epithelium
5
3
1
2
+ See 17 more…
cell line
A549
21
19
1
18
2
1
EndoC_BH1
8
1
8
3
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
WI38
5
1
1
+ See 14 more…
in vitro differentiated cells
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
+ See 3 more…
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