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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
322
candidate regulatory elements
259
gene expression
245
target gene predictions
239
accessible chromatin
173
chromatin state
92
differential activity
54
binding sites
49
variant allelic effects
34
histone modifications
9
Fine-mapped variants
9
eQTL
2
caQTL
Date released
496
September, 2022
322
February, 2021
155
September, 2023
127
November, 2021
76
February, 2024
41
May, 2021
38
March, 2023
37
June, 2020
25
May, 2020
23
August, 2021
21
January, 2020
20
January, 2021
16
March, 2020
15
February, 2020
15
November, 2022
12
February, 2023
10
October, 2022
8
April, 2020
6
August, 2018
5
October, 2019
4
August, 2017
4
March, 2024
3
January, 2022
3
November, 2019
2
May, 2019
2
May, 2022
1
July, 2020
Available data
945
bed bed3+
342
tsv
191
bigWig
169
bed bed9
78
txt
14
bigBed narrowPeak
6
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1487
Homo sapiens
Biosample type
837
primary cell
478
tissue
146
cell line
26
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1175
AMP
155
KPMP
127
ENCODE
20
T1D
8
LungMap
2
community
Genome assembly (visualization)
1129
hg19
382
GRCh38
BIOSAMPLE
TYPE
1487 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
accessible chromatin
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
Fine-mapped variants
eQTL
caQTL
primary cell
endothelial cell
9
7
15
2
2
1
1
2
hepatocyte
1
13
3
8
1
1
2
4
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
2
1
1
endothelial cell of umbilical vein
6
4
2
5
2
1
+ See 149 more…
tissue
lung
33
1
17
16
1
muscle of arm
33
16
1
16
1
muscle of leg
27
14
2
15
left lung
26
13
13
right lung
22
11
1
11
+ See 42 more…
cell line
A549
21
19
1
18
2
1
EndoC_BH1
8
1
8
3
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
+ See 15 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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