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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
180
candidate regulatory elements
106
target gene predictions
94
chromatin state
33
binding sites
30
accessible chromatin
13
histone modifications
2
variant allelic effects
1
eQTL
1
gene expression
Date released
276
September, 2022
125
February, 2021
18
June, 2020
15
November, 2021
9
October, 2022
7
May, 2021
3
April, 2020
2
August, 2017
2
February, 2024
1
January, 2022
1
March, 2020
1
March, 2024
Available data
366
bed bed3+
92
bed bed9
12
bigWig
1
tsv
Organism
460
Homo sapiens
Biosample type
194
cell line
183
tissue
80
primary cell
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
442
AMP
15
ENCODE
3
LungMap
Genome assembly (visualization)
458
hg19
108
GRCh38
BIOSAMPLE
TYPE
460 results
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candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
variant allelic effects
eQTL
gene expression
cell line
A549
21
19
18
2
1
1
MCF-7
9
6
5
3
1
2
IMR-90
2
2
1
2
1
1
GM12864
2
1
1
2
1
1
GM12865
2
1
1
2
1
1
+ See 21 more…
tissue
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
upper lobe of left lung
7
3
3
1
1
1
mammary gland
1
1
primary cell
fibroblast of lung
6
4
4
2
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
4
1
fibroblast of mammary gland
2
1
1
2
1
1
myoepithelial cell of mammary gland
4
2
2
+ See 6 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
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