Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
181
candidate regulatory elements
114
target gene predictions
102
chromatin state
100
accessible chromatin
28
binding sites
27
gene expression
23
histone modifications
10
eQTL
7
variant allelic effects
4
differential activity
3
Fine-mapped variants
1
caQTL
Date released
298
September, 2022
118
February, 2021
32
February, 2024
24
February, 2023
22
November, 2022
19
June, 2020
18
November, 2021
11
March, 2020
10
August, 2021
7
May, 2021
7
October, 2022
5
January, 2020
5
May, 2020
4
August, 2017
4
February, 2020
4
March, 2023
3
April, 2020
2
January, 2022
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
456
bed bed3+
98
bed bed9
68
bigWig
32
tsv
3
csv
1
bam
1
bigBed bed9
Organism
600
Homo sapiens
Biosample type
327
tissue
140
cell line
120
primary cell
13
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
579
AMP
18
ENCODE
3
LungMap
Genome assembly (visualization)
563
hg19
162
GRCh38
2
hg18
BIOSAMPLE
TYPE
600 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
lung
33
17
16
1
1
left lung
26
13
13
liver
13
10
9
4
1
1
2
7
1
1
right lung
22
11
11
1
retina
6
3
3
23
1
1
1
1
1
+ See 8 more…
cell line
A549
21
19
18
1
2
1
HepG2
2
3
2
2
3
5
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
WERI-Rb-1
2
1
1
1
2
1
+ See 11 more…
primary cell
hepatocyte
1
3
1
8
1
13
4
2
endothelial cell of hepatic sinusoid
6
6
4
fibroblast of lung
6
4
4
2
retinal pigment epithelial cell
2
1
1
3
2
1
hepatic stellate cell
1
1
1
3
1
1
1
+ See 12 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
Download