Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
188
candidate regulatory elements
162
target gene predictions
99
chromatin state
27
accessible chromatin
22
binding sites
15
histone modifications
12
gene expression
1
eQTL
1
variant allelic effects
Date released
291
September, 2022
123
February, 2021
52
February, 2024
16
June, 2020
11
May, 2021
11
November, 2021
8
August, 2021
5
October, 2022
3
April, 2020
2
August, 2017
2
March, 2020
1
February, 2020
1
January, 2022
1
March, 2024
Available data
417
bed bed3+
97
bed bed9
11
bigWig
11
tsv
Organism
527
Homo sapiens
Biosample type
223
cell line
216
tissue
57
primary cell
30
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
513
AMP
11
ENCODE
3
LungMap
Genome assembly (visualization)
514
hg19
160
GRCh38
BIOSAMPLE
TYPE
527 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
cell line
A549
21
19
18
1
2
1
H1-hESC
1
39
1
1
2
1
8
H9
7
8
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
+ See 22 more…
tissue
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
chorionic villus
8
4
4
upper lobe of left lung
7
3
3
1
1
1
+ See 5 more…
primary cell
trophoblast cell
7
5
4
1
1
fibroblast of lung
6
4
4
2
type II pneumocyte
2
4
1
lung microvascular endothelial cell
3
1
1
type I pneumocyte
1
3
+ See 6 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
cardiac mesoderm primordium
1
1
1
+ See 3 more…
stem cell
H1-hESC
1
See all biosamples
Download