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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
257
candidate regulatory elements
254
gene expression
222
accessible chromatin
target gene predictions
139
chromatin state
92
differential activity
55
binding sites
41
variant allelic effects
35
histone modifications
5
eQTL
2
caQTL
Date released
280
February, 2021
272
September, 2022
155
September, 2023
79
November, 2021
76
February, 2024
38
March, 2023
33
June, 2020
24
May, 2021
23
August, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
11
October, 2022
10
January, 2021
9
February, 2020
8
April, 2020
6
August, 2018
5
October, 2019
4
August, 2017
4
March, 2020
3
March, 2024
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
612
bed bed3+
325
tsv
175
bigWig
135
bed bed9
78
txt
11
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1102
Homo sapiens
Biosample type
726
primary cell
238
tissue
113
cell line
25
in vitro differentiated cells
Organ
827
epithelium
577
kidney
390
brain
382
connective tissue
295
musculature of body
235
vasculature
233
lung
233
pancreas
216
intestine
206
heart
195
limb
179
blood vessel
161
bodily fluid
160
skin of body
152
blood
135
liver
131
embryo
130
large intestine
110
extraembryonic component
100
eye
89
stomach
76
adipose tissue
73
bone element
68
mammary gland
67
artery
63
prostate gland
61
small intestine
56
placenta
53
lymph node
53
penis
52
adrenal gland
51
ureter
39
gonad
35
esophagus
35
thymus
34
spinal cord
26
spleen
25
uterus
22
nerve
22
testis
19
vein
18
lymphatic vessel
18
lymphoid tissue
17
thyroid gland
16
ovary
15
mouth
15
skeleton
13
bronchus
10
bone marrow
10
breast
8
tongue
8
vagina
7
urinary bladder
5
trachea
3
nose
3
pituitary gland
1
pericardium
Project
848
AMP
155
KPMP
79
ENCODE
10
T1D
8
LungMap
2
community
Genome assembly (visualization)
750
hg19
273
GRCh38
annotation_type!
target gene predictions
BIOSAMPLE
TYPE
1102 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
2
2
1
1
2
hepatocyte
1
13
8
1
1
2
4
epithelial cell of proximal tubule
2
16
1
1
1
1
glomerular endothelial cell
2
14
2
1
1
endothelial cell of hepatic sinusoid
4
6
6
+ See 148 more…
tissue
lung
33
1
16
1
placenta
26
1
14
1
2
1
left lung
26
13
right lung
22
1
11
pigmented layer of retina
20
+ See 20 more…
cell line
A549
21
1
18
2
1
EndoC_BH1
8
8
3
1
IMR-90
2
1
1
2
1
PC-9
2
1
1
1
1
WI38
5
1
+ See 15 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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