Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
211
candidate regulatory elements
156
target gene predictions
120
chromatin state
105
accessible chromatin
50
gene expression
41
binding sites
30
histone modifications
22
eQTL
18
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
327
September, 2022
183
February, 2021
59
November, 2021
27
June, 2020
20
May, 2021
19
February, 2024
17
September, 2023
15
October, 2022
12
January, 2020
12
May, 2020
11
August, 2021
11
March, 2020
8
August, 2017
8
February, 2020
7
January, 2022
7
March, 2023
7
November, 2022
6
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
573
bed bed3+
112
bed bed9
67
tsv
65
bigWig
7
txt
4
bigBed bed9
1
bigBed narrowPeak
Organism
777
Homo sapiens
Biosample type
320
primary cell
277
tissue
129
cell line
50
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
pericardium
Project
689
AMP
59
ENCODE
15
KPMP
6
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
701
hg19
204
GRCh38
2
hg18
organ_slims!
pericardium
BIOSAMPLE
TYPE
777 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
1
10
endothelial cell of umbilical vein
6
4
5
2
2
1
osteoblast
2
2
1
5
2
3
2
fibroblast of lung
6
4
4
2
+ See 49 more…
tissue
lung
33
17
16
1
1
left lung
26
13
13
right lung
22
11
11
1
adipose tissue
7
8
6
2
3
1
4
1
subcutaneous adipose tissue
2
1
2
5
6
1
1
3
+ See 11 more…
cell line
A549
21
19
18
1
2
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
GM23248
2
1
1
1
1
1
WI38
5
1
1
+ See 16 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download