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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
44
candidate regulatory elements
32
accessible chromatin
30
target gene predictions
25
binding sites
25
chromatin state
24
gene expression
18
histone modifications
8
eQTL
4
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
70
September, 2022
53
February, 2021
29
February, 2024
13
June, 2020
10
August, 2021
10
March, 2020
5
November, 2021
4
March, 2023
4
May, 2021
3
August, 2017
3
January, 2020
3
May, 2020
3
October, 2022
2
February, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
155
bed bed3+
28
tsv
23
bigWig
22
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
218
Homo sapiens
Biosample type
90
cell line
63
primary cell
58
tissue
7
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
213
AMP
5
ENCODE
Genome assembly (visualization)
186
hg19
68
GRCh38
2
hg18
organ_slims!
intestine
blood
BIOSAMPLE
TYPE
218 results
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Clear Filters
candidate regulatory elements
accessible chromatin
target gene predictions
binding sites
chromatin state
gene expression
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
cell line
HepG2
2
2
3
3
2
5
GM12864
2
1
1
2
1
1
GM12865
2
1
1
2
1
1
MM.1S
2
1
2
1
1
1
GM10248
2
1
1
1
1
+ See 14 more…
primary cell
hepatocyte
1
8
3
1
1
13
4
2
endothelial cell of hepatic sinusoid
6
6
4
hepatic stellate cell
1
3
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
13
4
10
1
9
1
2
7
1
1
right lobe of liver
2
1
1
1
1
3
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
See all biosamples
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