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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
194
candidate regulatory elements
157
target gene predictions
129
accessible chromatin
122
chromatin state
74
histone modifications
71
gene expression
48
binding sites
48
eQTL
42
Fine-mapped variants
30
variant allelic effects
16
differential activity
2
caQTL
2
pQTL
Date released
306
September, 2022
223
February, 2021
53
November, 2021
47
March, 2020
41
June, 2020
35
January, 2020
27
February, 2020
27
May, 2021
26
May, 2020
25
September, 2023
24
January, 2022
19
February, 2024
17
October, 2022
13
August, 2017
11
August, 2021
7
March, 2023
7
November, 2022
4
April, 2020
4
May, 2019
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
1
November, 2019
Available data
643
bed bed3+
135
tsv
109
bed bed9
75
bigWig
8
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
934
Homo sapiens
Biosample type
444
tissue
324
primary cell
109
cell line
56
in vitro differentiated cells
2
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
852
AMP
53
ENCODE
20
KPMP
4
ITG
4
LungMap
2
T1D
Genome assembly (visualization)
816
hg19
275
GRCh38
2
hg18
BIOSAMPLE
TYPE
935 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
histone modifications
gene expression
binding sites
eQTL
Fine-mapped variants
variant allelic effects
differential activity
caQTL
pQTL
tissue
brain
29
16
2
18
3
1
1
2
1
adipose tissue
7
8
2
6
3
1
4
1
caudate nucleus
5
3
2
4
1
1
2
3
1
subcutaneous adipose tissue
2
2
1
5
6
3
1
1
omental fat pad
5
2
2
2
2
2
3
+ See 67 more…
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
2
2
3
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
2
4
+ See 53 more…
cell line
SK-N-DZ
4
2
1
2
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 21 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
dermis microvascular lymphatic vessel endothelial cell
1
1
fibroblast
1
1
+ See 12 more…
stem cell
mesenchymal stem cell
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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