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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
136
candidate regulatory elements
88
target gene predictions
82
chromatin state
54
accessible chromatin
53
histone modifications
36
Fine-mapped variants
30
binding sites
29
eQTL
22
gene expression
17
variant allelic effects
2
differential activity
Date released
210
September, 2022
142
February, 2021
38
March, 2020
30
June, 2020
29
January, 2020
19
May, 2020
18
February, 2020
18
January, 2022
12
May, 2021
8
October, 2022
8
September, 2023
6
August, 2017
4
May, 2019
3
November, 2021
1
April, 2020
1
February, 2024
1
March, 2024
1
November, 2019
Available data
377
bed bed3+
76
bed bed9
72
tsv
24
bigWig
6
bigBed bed9
Organism
548
Homo sapiens
Biosample type
349
tissue
141
cell line
52
primary cell
6
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
540
AMP
5
KPMP
3
ENCODE
1
LungMap
Genome assembly (visualization)
501
hg19
165
GRCh38
BIOSAMPLE
TYPE
549 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
binding sites
eQTL
gene expression
variant allelic effects
differential activity
tissue
brain
29
16
18
2
3
1
2
1
1
caudate nucleus
5
3
4
2
1
3
2
1
1
substantia nigra
5
2
3
1
3
3
1
cerebellum
3
2
2
1
1
3
2
2
frontal cortex
2
2
2
2
3
2
2
1
+ See 56 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
GM12864
2
1
1
1
1
2
GM12865
2
1
1
1
1
2
+ See 25 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
dermis lymphatic vessel endothelial cell
2
2
2
cardiac fibroblast
3
2
+ See 8 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
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