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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
140
candidate regulatory elements
97
target gene predictions
78
chromatin state
49
accessible chromatin
30
gene expression
23
histone modifications
21
binding sites
11
eQTL
7
variant allelic effects
6
differential activity
3
Fine-mapped variants
1
caQTL
Date released
216
September, 2022
102
February, 2021
35
February, 2024
27
November, 2021
16
June, 2020
12
March, 2020
10
August, 2021
9
May, 2021
7
August, 2017
5
September, 2023
4
January, 2022
4
March, 2023
3
January, 2020
3
March, 2024
3
May, 2020
2
February, 2020
2
May, 2022
2
October, 2022
1
April, 2020
1
July, 2020
1
November, 2019
1
September, 2018
Available data
343
bed bed3+
71
bed bed9
37
bigWig
36
tsv
3
csv
1
bam
1
bigBed bed9
Organism
466
Homo sapiens
Biosample type
290
tissue
103
primary cell
64
cell line
9
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
433
AMP
27
ENCODE
5
KPMP
1
LungMap
Genome assembly (visualization)
423
hg19
144
GRCh38
2
hg18
BIOSAMPLE
TYPE
466 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
binding sites
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
liver
13
10
9
4
1
2
1
7
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
+ See 17 more…
primary cell
hepatocyte
1
3
1
8
13
4
1
2
endothelial cell of hepatic sinusoid
6
4
6
hepatic stellate cell
1
1
1
3
1
1
1
colon epithelial cell
3
3
dermis lymphatic vessel endothelial cell
2
2
2
+ See 11 more…
cell line
HepG2
2
3
2
2
5
3
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HuH-7
1
1
1
1
1
1
+ See 8 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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