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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
67
accessible chromatin
51
gene expression
47
target gene predictions
35
differential activity
28
candidate regulatory elements
19
chromatin state
15
eQTL
11
variant allelic effects
7
binding sites
7
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
50
September, 2022
47
March, 2023
36
February, 2021
33
May, 2021
25
February, 2024
21
November, 2021
20
January, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
May, 2020
6
October, 2019
5
June, 2020
5
September, 2023
4
January, 2020
4
January, 2022
3
August, 2017
2
February, 2020
November, 2019
1
April, 2019
1
April, 2020
1
February, 2023
1
January, 2018
1
June, 2021
Available data
171
bed bed3+
81
tsv
58
bigWig
15
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
296
Homo sapiens
Biosample type
143
primary cell
113
tissue
35
cell line
5
in vitro differentiated cells
Organ
948
epithelium
652
kidney
465
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
275
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
201
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
247
AMP
21
ENCODE
20
T1D
5
KPMP
2
community
1
LungMap
Genome assembly (visualization)
200
hg19
64
GRCh38
month_released!
November, 2019
BIOSAMPLE
TYPE
296 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 16 more…
tissue
islet of Langerhans
5
11
1
3
13
1
2
1
2
2
2
body of pancreas
2
5
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
7
8
1
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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