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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
79
accessible chromatin
58
target gene predictions
52
gene expression
47
candidate regulatory elements
35
differential activity
28
chromatin state
16
eQTL
11
variant allelic effects
8
binding sites
7
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
77
September, 2022
55
February, 2021
47
March, 2023
34
May, 2021
25
February, 2024
21
November, 2021
20
January, 2021
10
March, 2020
8
August, 2021
7
August, 2018
6
June, 2020
6
May, 2020
6
October, 2019
5
January, 2022
5
September, 2023
4
January, 2020
3
August, 2017
3
November, 2019
2
February, 2020
1
April, 2019
1
April, 2020
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
214
bed bed3+
82
tsv
69
bigWig
24
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
350
Homo sapiens
Biosample type
166
tissue
143
primary cell
36
cell line
5
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
301
AMP
21
ENCODE
20
T1D
5
KPMP
2
community
1
LungMap
Genome assembly (visualization)
252
hg19
85
GRCh38
BIOSAMPLE
TYPE
350 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
differential activity
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
3
13
1
2
1
2
2
2
spleen
2
8
1
15
6
1
1
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
+ See 18 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 16 more…
cell line
EndoC_BH1
8
1
8
3
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
1
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