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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
131
candidate regulatory elements
88
target gene predictions
82
chromatin state
49
histone modifications
48
accessible chromatin
39
Fine-mapped variants
31
eQTL
23
gene expression
20
binding sites
17
variant allelic effects
2
differential activity
Date released
210
September, 2022
124
February, 2021
41
March, 2020
30
January, 2020
24
June, 2020
19
February, 2020
19
January, 2022
19
May, 2020
12
May, 2021
8
September, 2023
7
October, 2022
6
August, 2017
4
May, 2019
3
November, 2021
1
April, 2020
1
February, 2024
1
March, 2024
1
November, 2019
Available data
352
bed bed3+
77
tsv
76
bed bed9
24
bigWig
6
bigBed bed9
Organism
529
Homo sapiens
Biosample type
385
tissue
82
cell line
56
primary cell
6
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
521
AMP
5
KPMP
3
ENCODE
1
LungMap
Genome assembly (visualization)
480
hg19
170
GRCh38
BIOSAMPLE
TYPE
530 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
Fine-mapped variants
eQTL
gene expression
binding sites
variant allelic effects
differential activity
tissue
brain
29
16
18
3
2
2
1
1
1
spinal cord
14
8
7
1
1
caudate nucleus
5
3
4
1
2
3
2
1
1
substantia nigra
5
2
3
1
3
3
1
cerebellum
3
2
2
1
1
3
2
2
+ See 58 more…
cell line
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
BE(2)-C
1
1
1
1
1
2
+ See 11 more…
primary cell
choroid plexus epithelial cell
2
1
1
1
1
1
astrocyte of the cerebellum
2
1
1
1
1
astrocyte of the hippocampus
2
1
1
1
1
dermis lymphatic vessel endothelial cell
2
2
2
cardiac fibroblast
3
2
+ See 9 more…
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell
1
1
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
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