Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
63
target gene predictions
56
candidate regulatory elements
46
binding sites
26
histone modifications
14
accessible chromatin
2
chromatin state
2
eQTL
2
gene expression
1
pQTL
Date released
79
February, 2021
60
September, 2022
29
February, 2024
19
October, 2022
14
June, 2020
4
May, 2021
3
August, 2021
2
August, 2017
2
March, 2024
Available data
208
bed bed3+
bed bed9
2
tsv
Organism
212
Homo sapiens
Biosample type
185
cell line
18
tissue
9
primary cell
Organ
899
epithelium
575
kidney
419
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
212
AMP
Genome assembly (visualization)
210
hg19
29
GRCh38
files.file_type!
bed bed9
BIOSAMPLE
TYPE
212 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
binding sites
histone modifications
accessible chromatin
chromatin state
eQTL
gene expression
pQTL
cell line
K562
23
7
2
1
1
1
GM12878
8
2
2
1
1
1
GM06990
1
2
2
1
1
GM19240
2
1
2
1
1
HAP-1
2
2
1
1
1
+ See 27 more…
tissue
Peyer's patch
3
7
1
blood
2
germinal center
1
1
cerebrospinal fluid
1
small intestine - terminal Ileum
1
+ See 1 more…
primary cell
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
See all biosamples
Download