Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
56
candidate regulatory elements
46
binding sites
34
target gene predictions
32
chromatin state
26
histone modifications
14
accessible chromatin
2
eQTL
2
gene expression
1
pQTL
Date released
90
September, 2022
79
February, 2021
February, 2024
19
October, 2022
14
June, 2020
4
May, 2021
3
August, 2021
2
August, 2017
2
March, 2024
Available data
179
bed bed3+
30
bed bed9
2
tsv
Organism
213
Homo sapiens
Biosample type
182
cell line
22
tissue
9
primary cell
Organ
562
epithelium
508
kidney
465
brain
366
connective tissue
349
musculature of body
298
lung
264
intestine
244
limb
240
heart
212
pancreas
205
vasculature
193
skin of body
190
bodily fluid
179
blood
165
large intestine
164
blood vessel
162
embryo
143
extraembryonic component
122
liver
108
stomach
104
eye
87
adipose tissue
86
bone element
80
mammary gland
80
small intestine
77
prostate gland
71
placenta
70
artery
64
penis
64
ureter
62
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
39
esophagus
34
spleen
30
uterus
26
testis
25
nerve
23
lymphoid tissue
23
vein
21
ovary
20
thyroid gland
19
mouth
18
skeleton
13
breast
13
pituitary gland
12
bronchus
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
213
AMP
Genome assembly (visualization)
211
hg19
30
GRCh38
month_released!
February, 2024
BIOSAMPLE
TYPE
213 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
binding sites
target gene predictions
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
pQTL
cell line
K562
7
2
7
7
1
1
GM12878
2
2
2
2
1
1
GM06990
2
2
1
1
1
1
HAP-1
2
1
2
1
1
1
HL-60
2
2
1
1
1
1
+ See 27 more…
tissue
Peyer's patch
7
3
3
1
germinal center
1
1
1
blood
2
cerebrospinal fluid
1
small intestine - terminal Ileum
1
+ See 1 more…
primary cell
peripheral blood mononuclear cell
4
1
1
peripheral blood stem cell
1
1
1
See all biosamples
Download