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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
251
gene expression
192
candidate regulatory elements
125
target gene predictions
117
accessible chromatin
99
chromatin state
89
differential activity
27
variant allelic effects
19
eQTL
13
histone modifications
binding sites
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
284
September, 2022
215
February, 2021
140
September, 2023
47
March, 2023
36
August, 2021
33
May, 2021
27
February, 2024
25
May, 2020
21
June, 2020
21
November, 2021
20
January, 2021
18
January, 2020
11
February, 2020
11
March, 2020
7
August, 2018
6
October, 2019
5
January, 2022
3
August, 2017
3
March, 2024
2
April, 2019
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
474
bed bed3+
328
tsv
95
bed bed9
93
bigWig
87
txt
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
941
Homo sapiens
Biosample type
433
primary cell
426
tissue
78
cell line
4
in vitro differentiated cells
Organ
906
epithelium
645
kidney
450
brain
429
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
758
AMP
140
KPMP
21
ENCODE
20
T1D
2
community
Genome assembly (visualization)
584
hg19
172
GRCh38
annotation_type!
binding sites
BIOSAMPLE
TYPE
941 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
variant allelic effects
eQTL
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
pancreatic beta cell
3
3
8
3
1
pancreatic ductal cell
3
3
6
3
1
2
pancreatic alpha cell
3
3
7
3
1
+ See 80 more…
tissue
kidney
7
29
14
10
16
1
1
2
islet of Langerhans
11
1
6
3
1
13
1
2
2
2
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
+ See 28 more…
cell line
EndoC_BH1
8
1
8
3
1
HEK293
3
1
1
1
1
GM18507
1
2
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 13 more…
in vitro differentiated cells
pancreatic ductal cell
3
renal cell carcinoma
1
See all biosamples
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