Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
67
accessible chromatin
50
target gene predictions
48
gene expression
33
candidate regulatory elements
33
differential activity
22
chromatin state
14
eQTL
11
variant allelic effects
7
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
59
September, 2022
47
March, 2023
36
February, 2021
33
May, 2021
26
February, 2024
20
January, 2021
18
November, 2021
9
March, 2020
8
August, 2021
7
August, 2018
6
June, 2020
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
3
August, 2017
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
177
bed bed3+
75
tsv
57
bigWig
18
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
299
Homo sapiens
Biosample type
130
tissue
126
primary cell
40
cell line
3
in vitro differentiated cells
Organ
940
epithelium
643
kidney
449
connective tissue
448
brain
369
musculature of body
311
lung
289
intestine
275
pancreas
261
vasculature
244
heart
238
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
199
blood vessel
174
large intestine
154
liver
146
extraembryonic component
119
stomach
107
eye
89
bone element
87
mammary gland
84
adipose tissue
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
71
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
Project
259
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
208
hg19
66
GRCh38
month_released!
February, 2020
BIOSAMPLE
TYPE
299 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
differential activity
chromatin state
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
6
1
11
3
13
1
1
2
2
2
2
body of pancreas
5
1
8
4
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
Peyer's patch
1
3
7
3
+ See 9 more…
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 12 more…
cell line
EndoC_BH1
8
1
8
3
1
GM18507
1
2
1
1
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download