Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
115
candidate regulatory elements
100
target gene predictions
88
accessible chromatin
68
chromatin state
50
gene expression
31
binding sites
28
histone modifications
22
eQTL
14
differential activity
13
variant allelic effects
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
180
September, 2022
128
February, 2021
52
November, 2021
22
June, 2020
19
February, 2024
17
May, 2021
17
September, 2023
11
August, 2021
11
October, 2022
9
February, 2020
9
March, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
May, 2020
7
November, 2022
6
January, 2020
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
387
bed bed3+
66
tsv
61
bed bed9
53
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
539
Homo sapiens
Biosample type
276
primary cell
173
tissue
50
in vitro differentiated cells
39
cell line
1
stem cell
Organ
949
epithelium
652
kidney
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
461
AMP
52
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
464
hg19
142
GRCh38
2
hg18
organ_slims!
brain
BIOSAMPLE
TYPE
539 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 44 more…
tissue
placenta
26
15
1
14
1
2
1
adipose tissue
7
8
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
Peyer's patch
7
3
1
3
+ See 10 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
GM18507
1
2
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
HTR-8/Svneo
1
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download