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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
62
accessible chromatin
50
target gene predictions
37
gene expression
33
candidate regulatory elements
30
differential activity
22
chromatin state
15
eQTL
12
binding sites
11
variant allelic effects
7
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
56
September, 2022
45
March, 2023
42
February, 2021
24
November, 2021
23
February, 2024
20
January, 2021
18
May, 2021
8
August, 2021
8
March, 2020
7
August, 2018
6
June, 2020
6
October, 2019
5
May, 2020
4
August, 2017
4
January, 2020
4
January, 2022
2
February, 2020
2
October, 2022
1
April, 2019
1
January, 2018
1
June, 2021
1
November, 2019
Available data
180
bed bed3+
64
tsv
59
bigWig
17
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
288
Homo sapiens
Biosample type
172
primary cell
116
tissue
cell line
in vitro differentiated cells
Organ
890
epithelium
610
kidney
387
connective tissue
385
brain
356
musculature of body
256
vasculature
255
intestine
247
heart
240
pancreas
237
limb
215
lung
198
blood vessel
140
large intestine
138
extraembryonic component
125
skin of body
123
liver
119
stomach
93
eye
85
adipose tissue
84
small intestine
73
adrenal gland
71
artery
70
placenta
64
ureter
58
embryo
49
thymus
48
mammary gland
45
esophagus
43
gonad
43
penis
40
spinal cord
36
bone element
34
spleen
25
nerve
prostate gland
23
ovary
23
thyroid gland
21
vein
20
lymphatic vessel
19
testis
18
lymphoid tissue
18
skeleton
18
uterus
16
bronchus
15
mouth
13
bodily fluid
13
bone marrow
13
breast
12
blood
10
tongue
10
urinary bladder
10
vagina
5
trachea
3
pituitary gland
1
pericardium
Project
244
AMP
24
ENCODE
20
T1D
Genome assembly (visualization)
211
hg19
70
GRCh38
biosample_type!
in vitro differentiated cells
cell line
organ_slims!
prostate gland
BIOSAMPLE
TYPE
288 results
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Clear Filters
accessible chromatin
target gene predictions
gene expression
candidate regulatory elements
differential activity
chromatin state
eQTL
binding sites
variant allelic effects
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 17 more…
tissue
islet of Langerhans
6
1
11
3
13
2
1
1
2
2
2
body of pancreas
5
2
8
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
mammary gland
1
1
+ See 7 more…
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