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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
26
candidate regulatory elements
18
target gene predictions
10
binding sites
6
accessible chromatin
4
histone modifications
1
chromatin state
1
variant allelic effects
Date released
26
September, 2022
25
February, 2021
6
November, 2021
3
June, 2020
2
May, 2021
2
October, 2022
1
August, 2017
1
February, 2024
Available data
66
bed bed3+
bed bed9
3
bigWig
Organism
66
Homo sapiens
Biosample type
32
primary cell
29
cell line
3
in vitro differentiated cells
2
tissue
Organ
899
epithelium
575
kidney
connective tissue
400
brain
304
musculature of body
264
pancreas
241
lung
234
intestine
234
vasculature
209
heart
194
limb
193
bodily fluid
188
embryo
184
blood
177
blood vessel
170
skin of body
142
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
testis
21
nerve
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
60
AMP
6
ENCODE
Genome assembly (visualization)
66
hg19
6
GRCh38
files.file_type!
bed bed9
organ_slims!
connective tissue
BIOSAMPLE
TYPE
66 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
accessible chromatin
histone modifications
chromatin state
variant allelic effects
primary cell
mammary epithelial cell
3
1
4
1
1
mammary gland epithelial cell
3
4
1
1
1
luminal epithelial cell of mammary gland
1
3
2
myoepithelial cell of mammary gland
4
2
cell line
MCF-7
9
6
3
1
2
T47D
3
2
MCF 10A
3
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
tissue
mammary gland
1
1
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