Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
19
target gene predictions
15
chromatin state
14
candidate regulatory elements
7
accessible chromatin
binding sites
1
variant allelic effects
Date released
42
September, 2022
February, 2021
6
November, 2021
4
June, 2020
2
May, 2021
1
August, 2017
1
February, 2024
Available data
42
bed bed3+
14
bed bed9
3
bigWig
Organism
56
Homo sapiens
Biosample type
32
primary cell
23
cell line
1
in vitro differentiated cells
Organ
742
epithelium
462
kidney
350
brain
340
connective tissue
282
musculature of body
245
pancreas
237
lung
217
intestine
207
heart
207
vasculature
186
limb
161
embryo
160
blood vessel
132
skin of body
127
large intestine
125
bodily fluid
122
liver
118
blood
112
extraembryonic component
90
eye
90
stomach
72
uterus
66
adipose tissue
66
small intestine
59
adrenal gland
59
artery
56
mammary gland
54
placenta
52
bone element
49
prostate gland
46
ureter
38
thymus
37
gonad
35
esophagus
34
penis
33
lymph node
spinal cord
24
spleen
22
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
17
testis
16
lymphatic vessel
15
mouth
15
vein
12
pituitary gland
11
bronchus
10
breast
9
skeleton
9
urinary bladder
8
bone marrow
8
tongue
8
vagina
4
nose
1
pericardium
1
trachea
Project
50
AMP
6
ENCODE
Genome assembly (visualization)
56
hg19
20
GRCh38
month_released!
February, 2021
organ_slims!
spinal cord
annotation_type!
binding sites
BIOSAMPLE
TYPE
56 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
chromatin state
candidate regulatory elements
accessible chromatin
variant allelic effects
primary cell
mammary gland epithelial cell
4
3
3
1
1
luminal epithelial cell of mammary gland
3
1
1
2
myoepithelial cell of mammary gland
2
2
2
fibroblast of mammary gland
1
1
1
1
mammary epithelial cell
1
1
1
cell line
MCF-7
6
5
5
1
T47D
2
2
2
in vitro differentiated cells
mammary gland epithelial cell
1
Download