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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
72
accessible chromatin
63
target gene predictions
52
candidate regulatory elements
48
gene expression
33
differential activity
32
chromatin state
15
eQTL
14
binding sites
12
variant allelic effects
11
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
86
September, 2022
59
February, 2021
47
March, 2023
35
May, 2021
26
February, 2024
24
November, 2021
20
January, 2021
9
March, 2020
8
August, 2021
8
June, 2020
7
August, 2018
6
May, 2020
6
October, 2019
4
August, 2017
4
January, 2020
4
January, 2022
October, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
229
bed bed3+
76
tsv
60
bigWig
27
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
361
Homo sapiens
Biosample type
170
primary cell
116
tissue
69
cell line
6
in vitro differentiated cells
Organ
943
epithelium
650
kidney
460
brain
446
connective tissue
372
musculature of body
307
lung
288
intestine
277
pancreas
262
vasculature
255
heart
244
limb
214
embryo
202
blood vessel
200
skin of body
199
bodily fluid
188
blood
173
large intestine
155
liver
145
extraembryonic component
119
stomach
107
eye
89
adipose tissue
88
bone element
84
mammary gland
84
small intestine
82
uterus
78
prostate gland
74
artery
73
adrenal gland
72
placenta
64
ureter
62
penis
60
lymph node
49
gonad
49
thymus
45
esophagus
42
spinal cord
34
spleen
25
nerve
25
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
315
AMP
24
ENCODE
20
T1D
2
community
Genome assembly (visualization)
270
hg19
81
GRCh38
month_released!
October, 2022
BIOSAMPLE
TYPE
361 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
differential activity
chromatin state
eQTL
binding sites
variant allelic effects
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
1
2
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
4
3
3
1
+ See 17 more…
tissue
islet of Langerhans
6
1
11
3
13
2
1
1
2
2
2
body of pancreas
5
8
2
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
mammary gland
1
1
+ See 7 more…
cell line
MCF-7
1
6
9
5
2
2
EndoC_BH1
8
1
8
3
1
T47D
2
3
2
Panc1
2
2
1
8988T
1
1
1
+ See 4 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
See all biosamples
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