Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
74
target gene predictions
71
candidate regulatory elements
57
binding sites
29
histone modifications
19
accessible chromatin
3
chromatin state
1
variant allelic effects
Date released
98
February, 2021
74
September, 2022
29
February, 2024
22
October, 2022
16
June, 2020
6
May, 2021
6
November, 2021
3
August, 2017
Available data
254
bed bed3+
37
bed bed9
3
bigWig
1
tsv
Organism
254
Homo sapiens
Biosample type
201
cell line
48
primary cell
3
in vitro differentiated cells
2
tissue
Organ
547
epithelium
330
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
175
limb
173
heart
165
skin of body
163
vasculature
159
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
98
eye
93
stomach
76
uterus
73
mammary gland
70
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
bone marrow
11
pituitary gland
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
248
AMP
6
ENCODE
Genome assembly (visualization)
254
hg19
34
GRCh38
BIOSAMPLE
TYPE
254 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
binding sites
histone modifications
accessible chromatin
chromatin state
variant allelic effects
cell line
K562
23
7
2
1
1
1
MCF-7
6
9
3
2
1
GM12878
8
2
2
1
1
1
GM06990
1
2
2
1
1
GM19240
2
1
2
1
1
+ See 26 more…
primary cell
mammary epithelial cell
1
3
4
1
1
mammary gland epithelial cell
4
3
1
1
1
fibroblast of mammary gland
1
2
2
1
1
luminal epithelial cell of mammary gland
3
1
2
myoepithelial cell of mammary gland
2
4
+ See 2 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
tissue
mammary gland
1
1
See all biosamples
Download