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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
99
candidate regulatory elements
95
target gene predictions
57
binding sites
54
chromatin state
29
histone modifications
26
accessible chromatin
3
eQTL
2
gene expression
2
variant allelic effects
Date released
153
September, 2022
112
February, 2021
30
February, 2024
22
October, 2022
17
June, 2020
16
November, 2021
8
May, 2021
3
August, 2017
2
August, 2021
2
March, 2024
1
January, 2022
1
March, 2020
Available data
311
bed bed3+
51
bed bed9
9
bigWig
2
tsv
Organism
367
Homo sapiens
Biosample type
231
cell line
67
tissue
66
primary cell
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
351
AMP
16
ENCODE
Genome assembly (visualization)
364
hg19
96
GRCh38
BIOSAMPLE
TYPE
367 results
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Clear Filters
candidate regulatory elements
target gene predictions
binding sites
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
variant allelic effects
cell line
K562
7
23
2
7
1
1
MCF-7
9
6
3
5
2
1
GM12878
2
8
2
2
1
1
GM06990
2
1
2
1
1
1
GM19240
1
2
2
1
1
1
+ See 26 more…
tissue
adrenal gland
28
17
14
1
1
1
blood
2
mammary gland
1
1
whole blood
1
primary cell
mammary gland epithelial cell
3
4
1
3
1
1
mammary epithelial cell
3
1
4
1
1
fibroblast of mammary gland
2
1
2
1
1
1
myoepithelial cell of mammary gland
4
2
2
luminal epithelial cell of mammary gland
1
3
1
2
+ See 6 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
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