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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
150
candidate regulatory elements
120
target gene predictions
77
chromatin state
76
binding sites
43
histone modifications
32
accessible chromatin
5
eQTL
3
gene expression
2
variant allelic effects
1
pQTL
Date released
219
September, 2022
170
February, 2021
30
February, 2024
26
October, 2022
24
June, 2020
16
November, 2021
11
May, 2021
4
August, 2017
3
August, 2021
3
January, 2022
3
March, 2024
Available data
428
bed bed3+
73
bed bed9
8
bigWig
3
tsv
Organism
509
Homo sapiens
Biosample type
311
cell line
155
primary cell
31
tissue
12
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
493
AMP
16
ENCODE
Genome assembly (visualization)
503
hg19
120
GRCh38
BIOSAMPLE
TYPE
509 results
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candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
variant allelic effects
pQTL
cell line
K562
7
23
7
2
1
1
MCF-7
9
6
5
3
2
1
GM12878
2
8
2
2
1
1
GM06990
2
1
1
2
1
1
GM19240
1
2
1
2
1
1
+ See 49 more…
primary cell
foreskin keratinocyte
11
4
4
keratinocyte
3
5
3
1
2
2
1
foreskin fibroblast
6
2
1
4
2
1
mammary gland epithelial cell
3
4
3
1
1
1
fibroblast of dermis
4
4
3
1
+ See 15 more…
tissue
lower leg skin
6
2
2
skin of body
1
1
1
3
suprapubic skin
3
blood
2
mammary gland
1
1
+ See 6 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
iPS DF 4.7 Cell Line
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
skin fibroblast
1
See all biosamples
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