Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
30
candidate regulatory elements
18
target gene predictions
17
chromatin state
14
binding sites
7
histone modifications
4
accessible chromatin
1
variant allelic effects
Date released
45
September, 2022
33
February, 2021
4
June, 2020
3
October, 2022
2
May, 2021
1
August, 2017
1
February, 2024
1
May, 2020
1
May, 2022
Available data
75
bed bed3+
15
bed bed9
1
bed bed9+
Organism
91
Homo sapiens
Biosample type
50
primary cell
36
cell line
3
in vitro differentiated cells
2
tissue
Organ
638
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
237
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
91
AMP
7
ENCODE
2
T1D
Genome assembly (visualization)
91
hg19
15
GRCh38
BIOSAMPLE
TYPE
91 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
variant allelic effects
primary cell
mammary gland epithelial cell
3
3
3
1
1
mammary epithelial cell
3
1
1
4
1
fibroblast of mammary gland
2
1
1
2
1
1
myoepithelial cell of mammary gland
4
2
2
stromal cell of bone marrow
2
1
1
+ See 5 more…
cell line
MCF-7
9
6
5
3
2
1
T47D
3
2
2
MCF 10A
3
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
tissue
mammary gland
1
1
See all biosamples
Download