Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
106
candidate regulatory elements
96
target gene predictions
94
accessible chromatin
62
chromatin state
49
gene expression
binding sites
29
histone modifications
19
eQTL
17
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
159
September, 2022
106
February, 2021
56
November, 2021
23
June, 2020
19
February, 2024
18
May, 2021
17
September, 2023
11
August, 2021
10
January, 2020
10
May, 2020
9
February, 2020
9
March, 2020
8
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2022
Available data
355
bed bed3+
63
tsv
58
bigWig
54
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
496
Homo sapiens
Biosample type
293
primary cell
95
tissue
58
cell line
49
in vitro differentiated cells
1
stem cell
Organ
906
epithelium
645
kidney
450
brain
427
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
416
AMP
56
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
425
hg19
141
GRCh38
2
hg18
annotation_type!
binding sites
BIOSAMPLE
TYPE
496 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
2
6
pericyte cell
1
10
10
1
fibroblast of lung
6
4
4
osteoblast
2
2
5
1
2
2
fibroblast of cardiac tissue
3
4
2
3
+ See 47 more…
tissue
adipose tissue
7
8
2
6
3
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 7 more…
cell line
MCF-7
9
6
1
5
2
T47D
3
2
2
GM23248
2
1
1
1
1
HT1080
2
1
1
fibroblast of cardiac tissue
2
2
+ See 10 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
mesenchymal stem cell
3
3
1
2
1
chondrocyte
5
mammary gland epithelial cell
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 9 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download