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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
158
candidate regulatory elements
102
target gene predictions
81
chromatin state
32
accessible chromatin
18
binding sites
13
histone modifications
6
eQTL
6
variant allelic effects
5
gene expression
Date released
227
September, 2022
109
February, 2021
29
November, 2021
16
June, 2020
9
February, 2024
8
May, 2021
6
January, 2022
5
August, 2017
5
March, 2024
4
October, 2022
3
March, 2020
Available data
334
bed bed3+
76
bed bed9
16
bigWig
5
tsv
Organism
421
Homo sapiens
Biosample type
269
tissue
79
primary cell
70
cell line
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
392
AMP
29
ENCODE
Genome assembly (visualization)
410
hg19
113
GRCh38
BIOSAMPLE
TYPE
421 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
variant allelic effects
gene expression
tissue
small intestine
29
17
15
1
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
Peyer's patch
7
3
3
1
+ See 22 more…
primary cell
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
1
4
fibroblast of mammary gland
2
1
1
1
2
1
myoepithelial cell of mammary gland
4
2
2
luminal epithelial cell of mammary gland
1
3
1
2
+ See 9 more…
cell line
MCF-7
9
6
5
1
3
2
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
T47D
3
2
2
HCT116
2
3
1
+ See 6 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
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