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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
281
candidate regulatory elements
207
gene expression
143
target gene predictions
142
chromatin state
77
accessible chromatin
56
differential activity
25
variant allelic effects
21
binding sites
13
histone modifications
9
Fine-mapped variants
9
eQTL
Date released
405
September, 2022
274
February, 2021
140
September, 2023
29
May, 2020
28
August, 2021
25
June, 2020
21
January, 2020
15
February, 2020
12
March, 2020
9
November, 2021
5
May, 2021
5
October, 2022
3
January, 2022
3
March, 2024
3
May, 2019
2
February, 2024
2
November, 2019
1
April, 2019
1
August, 2017
Available data
557
bed bed3+
268
tsv
141
bed bed9
87
txt
53
bigWig
6
bigBed bed9
Organism
983
Homo sapiens
Biosample type
539
tissue
356
primary cell
84
cell line
4
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
834
AMP
140
KPMP
9
ENCODE
Genome assembly (visualization)
711
hg19
203
GRCh38
BIOSAMPLE
TYPE
983 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
eQTL
tissue
kidney
29
7
14
16
10
1
1
2
1
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
+ See 39 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
mammary gland epithelial cell
3
4
3
1
1
1
glomerular visceral epithelial cell
2
5
1
1
2
kidney tubule cell
3
1
2
2
2
+ See 69 more…
cell line
MCF-7
9
6
5
1
3
2
HEK293
3
1
1
1
2
1
GM23248
2
1
1
1
1
1
T47D
3
2
2
ACHN
2
1
1
1
+ See 11 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
renal cell carcinoma
1
See all biosamples
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