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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
233
candidate regulatory elements
144
target gene predictions
137
chromatin state
69
accessible chromatin
55
histone modifications
45
Fine-mapped variants
34
eQTL
30
binding sites
26
variant allelic effects
24
gene expression
Date released
360
September, 2022
196
February, 2021
47
March, 2020
36
January, 2020
31
June, 2020
29
May, 2020
24
February, 2020
20
January, 2022
16
May, 2021
9
October, 2022
7
August, 2017
6
May, 2019
6
November, 2021
3
November, 2019
3
September, 2023
2
February, 2024
2
March, 2024
Available data
557
bed bed3+
130
bed bed9
84
tsv
38
bigWig
10
bigBed bed9
Organism
796
Homo sapiens
Biosample type
587
tissue
120
cell line
82
primary cell
7
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
791
AMP
6
ENCODE
Genome assembly (visualization)
747
hg19
250
GRCh38
BIOSAMPLE
TYPE
797 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
Fine-mapped variants
eQTL
binding sites
variant allelic effects
gene expression
tissue
brain
29
16
18
2
3
2
1
1
1
muscle of arm
33
16
16
1
1
muscle of leg
27
14
15
2
tibial nerve
6
3
4
3
3
2
2
2
caudate nucleus
5
3
4
2
1
3
2
1
1
+ See 80 more…
cell line
MCF-7
9
6
5
1
2
3
SK-N-DZ
4
2
2
1
1
SK-N-SH
4
3
2
1
pituitary stalk
10
SK-N-MC
2
1
1
1
1
2
+ See 13 more…
primary cell
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
1
4
fibroblast of mammary gland
2
1
1
1
1
2
myoepithelial cell of mammary gland
4
2
2
choroid plexus epithelial cell
2
1
1
1
1
1
+ See 10 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
hippocampal neuron
1
1
ESC dervived hypothalamic neuron (arcuate nucleus)
1
ESC dervived hypothalamic progenitor (arcuate nucleus)
1
stem cell
undifferentiated ESC (H9 cell line)
1
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