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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
76
accessible chromatin
73
target gene predictions
69
candidate regulatory elements
50
gene expression
39
chromatin state
33
differential activity
18
eQTL
17
binding sites
variant allelic effects
11
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
107
September, 2022
68
February, 2021
47
March, 2023
35
May, 2021
28
November, 2021
20
January, 2021
19
February, 2024
10
June, 2020
10
March, 2020
8
August, 2021
7
August, 2018
7
January, 2022
6
October, 2019
4
August, 2017
4
January, 2020
3
October, 2022
2
February, 2020
2
March, 2024
2
May, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
251
bed bed3+
78
tsv
58
bigWig
34
bed bed9
10
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
395
Homo sapiens
Biosample type
172
primary cell
148
tissue
69
cell line
6
in vitro differentiated cells
Organ
908
epithelium
636
kidney
449
brain
444
connective tissue
368
musculature of body
310
lung
286
intestine
266
pancreas
251
vasculature
245
heart
236
limb
218
bodily fluid
215
embryo
207
blood
203
skin of body
195
blood vessel
174
large intestine
152
liver
146
extraembryonic component
117
stomach
107
eye
89
bone element
86
adipose tissue
86
mammary gland
84
small intestine
83
uterus
77
prostate gland
73
placenta
72
adrenal gland
71
artery
64
penis
62
lymph node
61
ureter
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
nerve
23
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
345
AMP
28
ENCODE
20
T1D
2
community
Genome assembly (visualization)
299
hg19
95
GRCh38
annotation_type!
variant allelic effects
BIOSAMPLE
TYPE
395 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
chromatin state
differential activity
eQTL
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
2
pancreatic beta cell
8
3
3
3
pancreatic alpha cell
7
3
3
3
pancreatic acinar cell
6
3
3
3
pancreatic delta cell
5
4
3
3
+ See 19 more…
tissue
islet of Langerhans
6
1
11
3
13
2
1
2
2
2
body of pancreas
5
8
2
4
1
3
pancreas
5
5
5
3
1
1
1
endocrine pancreas
4
7
4
esophagus muscularis mucosa
1
2
5
2
1
+ See 13 more…
cell line
MCF-7
1
6
9
5
3
2
EndoC_BH1
8
1
8
3
T47D
2
3
2
Panc1
2
2
1
8988T
1
1
1
+ See 4 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
See all biosamples
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