Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
76
candidate regulatory elements
49
target gene predictions
41
chromatin state
18
accessible chromatin
17
binding sites
14
eQTL
13
gene expression
9
histone modifications
6
Fine-mapped variants
4
variant allelic effects
2
differential activity
Date released
114
September, 2022
69
February, 2021
8
March, 2020
8
November, 2021
7
June, 2020
6
August, 2021
6
May, 2021
5
February, 2020
4
January, 2020
4
January, 2022
4
October, 2022
3
August, 2017
3
February, 2024
3
May, 2020
2
September, 2018
1
January, 2018
1
November, 2022
Available data
178
bed bed3+
38
bed bed9
22
tsv
10
bigWig
1
bigBed bed9
Organism
249
Homo sapiens
Biosample type
146
tissue
57
primary cell
42
cell line
4
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
241
AMP
8
ENCODE
Genome assembly (visualization)
228
hg19
62
GRCh38
2
hg18
BIOSAMPLE
TYPE
249 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
eQTL
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
differential activity
tissue
placenta
26
15
14
1
1
1
2
adipose tissue
7
8
6
2
1
4
3
1
subcutaneous adipose tissue
2
1
2
6
5
3
1
1
omental fat pad
5
2
2
2
2
2
3
subcutaneous abdominal adipose tissue
5
1
+ See 5 more…
primary cell
mammary gland epithelial cell
3
4
3
1
1
1
mammary epithelial cell
3
1
1
1
4
fibroblast of mammary gland
2
1
1
1
2
1
fibroblast of villous mesenchyme
2
1
1
1
2
1
myoepithelial cell of mammary gland
4
2
2
+ See 4 more…
cell line
MCF-7
9
6
5
1
3
2
T47D
3
2
2
HTR-8/Svneo
1
1
1
MCF 10A
3
adipose tissue derived mesenchymal stem cell
1
1
+ See 1 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
white adipose cell
1
See all biosamples
Download