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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
target gene predictions
54
candidate regulatory elements
27
chromatin state
19
binding sites
15
accessible chromatin
8
histone modifications
4
eQTL
4
gene expression
1
variant allelic effects
Date released
78
September, 2022
52
February, 2024
50
February, 2021
10
June, 2020
10
November, 2021
5
May, 2021
5
October, 2022
4
January, 2022
4
March, 2024
1
August, 2017
1
March, 2020
Available data
186
bed bed3+
26
bed bed9
5
bigWig
4
tsv
Organism
220
Homo sapiens
Biosample type
108
cell line
55
primary cell
54
tissue
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
210
AMP
10
ENCODE
Genome assembly (visualization)
212
hg19
91
GRCh38
BIOSAMPLE
TYPE
220 results
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target gene predictions
candidate regulatory elements
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
gene expression
variant allelic effects
cell line
HeLa-S3
55
5
3
1
MCF-7
6
9
5
3
1
2
T47D
2
3
2
NT2-D1 cell
1
1
1
2
1
MCF 10A
3
+ See 2 more…
primary cell
mammary gland epithelial cell
4
3
3
1
1
1
mammary epithelial cell
1
3
1
4
1
fibroblast of mammary gland
1
2
1
2
1
1
myoepithelial cell of mammary gland
2
4
2
luminal epithelial cell of mammary gland
3
1
1
2
+ See 5 more…
tissue
ovary
6
8
4
1
1
1
testis
3
7
3
1
1
1
1
1
uterus
2
3
1
1
1
1
endometrium cancer
1
1
mammary gland
1
1
+ See 2 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
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