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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
152
gene expression
108
candidate regulatory elements
81
accessible chromatin
67
target gene predictions
41
variant allelic effects
37
binding sites
28
differential activity
24
histone modifications
3
chromatin state
3
eQTL
1
caQTL
Date released
200
February, 2021
110
September, 2022
44
February, 2024
36
March, 2023
34
May, 2021
26
June, 2020
20
August, 2021
15
November, 2022
14
May, 2020
11
February, 2023
9
February, 2020
6
August, 2018
6
March, 2020
6
October, 2022
3
August, 2017
3
March, 2024
1
July, 2020
1
May, 2022
Available data
358
bed bed3+
161
tsv
78
txt
40
bigWig
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
545
Homo sapiens
Biosample type
422
primary cell
57
tissue
41
cell line
25
in vitro differentiated cells
Organ
531
epithelium
407
kidney
314
brain
312
connective tissue
279
musculature of body
228
lung
210
intestine
194
pancreas
166
limb
165
bodily fluid
162
heart
157
skin of body
156
blood
141
vasculature
135
embryo
131
large intestine
109
extraembryonic component
108
blood vessel
96
liver
93
eye
86
stomach
67
mammary gland
66
adipose tissue
64
bone element
64
prostate gland
60
small intestine
54
lymph node
54
penis
54
placenta
48
adrenal gland
48
ureter
42
artery
37
gonad
37
thymus
31
esophagus
30
spinal cord
26
spleen
25
uterus
20
testis
18
lymphoid tissue
18
vein
16
ovary
16
thyroid gland
14
mouth
14
nerve
12
pituitary gland
11
bronchus
10
breast
10
lymphatic vessel
9
bone marrow
8
tongue
8
urinary bladder
7
skeleton
7
vagina
5
trachea
3
nose
1
pericardium
Project
545
AMP
155
KPMP
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
463
hg19
GRCh38
assembly!
GRCh38
BIOSAMPLE
TYPE
545 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
variant allelic effects
binding sites
differential activity
histone modifications
chromatin state
eQTL
caQTL
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
endothelial cell
9
3
2
2
1
1
1
glomerular endothelial cell
14
2
1
1
1
hepatocyte
8
1
1
2
2
1
1
endothelial cell of umbilical vein
6
1
4
1
2
1
+ See 86 more…
tissue
pigmented layer of retina
20
breast epithelium
5
1
3
esophagus squamous epithelium
6
1
2
tongue
4
1
2
kidney epithelium
1
1
+ See 10 more…
cell line
EndoC_BH1
8
7
1
1
1
keratinocyte
3
1
ACC112
2
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 7 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
foreskin keratinocyte
1
1
1
hepatocyte
2
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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