Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
86
candidate regulatory elements
81
target gene predictions
68
accessible chromatin
51
chromatin state
49
gene expression
31
binding sites
25
histone modifications
22
eQTL
16
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
129
September, 2022
112
February, 2021
50
November, 2021
June, 2020
18
February, 2024
17
September, 2023
16
May, 2021
12
October, 2022
11
August, 2021
10
January, 2020
10
May, 2020
9
February, 2020
9
March, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
March, 2024
Available data
319
bed bed3+
65
tsv
55
bigWig
44
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
453
Homo sapiens
Biosample type
272
primary cell
104
tissue
47
in vitro differentiated cells
29
cell line
1
stem cell
Organ
922
epithelium
635
kidney
444
brain
440
connective tissue
367
musculature of body
304
lung
276
intestine
273
pancreas
259
vasculature
250
heart
237
limb
205
bodily fluid
205
embryo
199
blood vessel
194
blood
194
skin of body
165
large intestine
151
liver
140
extraembryonic component
114
stomach
103
eye
88
adipose tissue
84
bone element
83
mammary gland
83
small intestine
79
uterus
72
artery
72
prostate gland
71
adrenal gland
71
placenta
63
ureter
61
penis
54
lymph node
48
thymus
44
gonad
41
esophagus
41
spinal cord
32
spleen
24
nerve
23
testis
21
lymphoid tissue
21
ovary
21
thyroid gland
21
vein
20
lymphatic vessel
18
skeleton
17
mouth
15
bronchus
13
bone marrow
12
pituitary gland
11
breast
9
vagina
8
tongue
8
urinary bladder
4
trachea
3
nose
1
pericardium
Project
377
AMP
50
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
379
hg19
126
GRCh38
2
hg18
month_released!
June, 2020
March, 2024
BIOSAMPLE
TYPE
453 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
1
10
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
4
2
osteoblast
2
2
3
1
2
3
2
+ See 43 more…
tissue
adipose tissue
7
8
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
tongue
4
2
2
subcutaneous abdominal adipose tissue
5
1
+ See 8 more…
in vitro differentiated cells
adipocyte
4
6
3
6
1
1
1
mesenchymal stem cell
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
2
1
1
1
1
ACC112
2
1
1
HT1080
2
1
1
fibroblast of cardiac tissue
1
2
foreskin fibroblast
1
1
1
+ See 5 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download