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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
28
candidate regulatory elements
21
target gene predictions
19
chromatin state
11
accessible chromatin
10
histone modifications
9
eQTL
6
binding sites
4
gene expression
3
Fine-mapped variants
1
caQTL
1
variant allelic effects
Date released
52
September, 2022
24
February, 2021
7
August, 2021
6
March, 2020
5
June, 2020
3
August, 2017
2
February, 2020
2
January, 2020
2
January, 2022
2
May, 2021
2
May, 2022
February, 2024
1
March, 2024
1
May, 2020
1
November, 2019
1
November, 2021
1
October, 2022
1
September, 2018
Available data
79
bed bed3+
16
bed bed9
8
tsv
5
bigWig
1
bam
1
bigBed bed9
Organism
113
Homo sapiens
Biosample type
68
tissue
32
cell line
13
primary cell
Organ
epithelium
651
kidney
465
brain
442
connective tissue
360
musculature of body
310
lung
283
intestine
252
pancreas
250
heart
249
vasculature
244
limb
203
skin of body
190
bodily fluid
189
blood vessel
179
blood
171
large intestine
164
embryo
146
extraembryonic component
127
liver
117
stomach
108
eye
89
bone element
87
adipose tissue
86
mammary gland
84
small intestine
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
43
esophagus
43
spinal cord
34
spleen
32
uterus
26
testis
25
nerve
23
lymphoid tissue
23
ovary
23
vein
22
thyroid gland
21
lymphatic vessel
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
112
AMP
1
ENCODE
Genome assembly (visualization)
104
hg19
31
GRCh38
2
hg18
organ_slims!
epithelium
month_released!
February, 2024
BIOSAMPLE
TYPE
113 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
binding sites
gene expression
Fine-mapped variants
caQTL
variant allelic effects
tissue
liver
13
10
9
4
2
7
1
1
1
right lobe of liver
2
1
1
1
1
3
tongue
4
2
2
1
minor salivary gland
1
1
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
ACC112
2
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
primary cell
hepatic stellate cell
1
1
1
3
1
1
1
fibroblast of gingiva
2
1
1
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