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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
227
gene expression
190
candidate regulatory elements
100
target gene predictions
98
chromatin state
74
accessible chromatin
60
differential activity
20
binding sites
20
histone modifications
20
variant allelic effects
13
eQTL
3
Fine-mapped variants
1
caQTL
Date released
283
September, 2022
218
February, 2021
140
September, 2023
38
August, 2021
30
February, 2024
22
May, 2020
21
June, 2020
17
January, 2020
13
March, 2020
11
February, 2020
8
November, 2021
4
March, 2023
3
August, 2017
3
January, 2022
3
March, 2024
3
May, 2021
3
October, 2022
2
May, 2022
1
April, 2019
1
July, 2020
1
May, 2019
November, 2019
1
September, 2018
Available data
422
bed bed3+
280
tsv
95
bed bed9
87
txt
58
bigWig
3
bigBed bed9
3
csv
1
bam
Organism
826
Homo sapiens
Biosample type
376
primary cell
369
tissue
73
cell line
8
in vitro differentiated cells
Organ
948
epithelium
652
kidney
465
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
275
pancreas
263
vasculature
252
heart
242
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
201
blood vessel
174
large intestine
155
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
678
AMP
140
KPMP
8
ENCODE
Genome assembly (visualization)
527
hg19
169
GRCh38
2
hg18
month_released!
November, 2019
BIOSAMPLE
TYPE
826 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
13
1
3
1
8
1
4
2
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
1
1
2
1
endothelial cell of hepatic sinusoid
4
6
6
glomerular visceral epithelial cell
5
2
1
1
2
+ See 69 more…
tissue
kidney
7
29
14
16
10
1
2
1
1
liver
1
13
10
9
3
1
1
2
7
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 19 more…
cell line
HepG2
2
3
2
2
3
5
HEK293
3
1
1
1
2
1
HuH-7
1
1
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
+ See 12 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
renal cell carcinoma
1
See all biosamples
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