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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
247
candidate regulatory elements
237
gene expression
184
target gene predictions
126
chromatin state
87
accessible chromatin
60
differential activity
33
binding sites
31
histone modifications
20
variant allelic effects
13
eQTL
3
Fine-mapped variants
1
caQTL
Date released
364
September, 2022
271
February, 2021
140
September, 2023
81
February, 2024
46
August, 2021
31
June, 2020
22
May, 2020
17
January, 2020
14
March, 2020
11
February, 2020
10
May, 2021
10
November, 2021
4
August, 2017
4
March, 2023
4
October, 2022
3
January, 2022
3
March, 2024
2
May, 2022
1
April, 2019
1
July, 2020
1
May, 2019
1
November, 2019
1
September, 2018
Available data
601
bed bed3+
290
tsv
122
bed bed9
87
txt
61
bigWig
3
bigBed bed9
3
csv
1
bam
Organism
1042
Homo sapiens
Biosample type
405
tissue
398
primary cell
200
cell line
38
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
892
AMP
140
KPMP
10
ENCODE
Genome assembly (visualization)
733
hg19
250
GRCh38
2
hg18
BIOSAMPLE
TYPE
1042 results
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Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
accessible chromatin
differential activity
binding sites
histone modifications
variant allelic effects
eQTL
Fine-mapped variants
caQTL
tissue
kidney
29
7
14
16
10
1
2
1
1
liver
13
1
10
9
4
1
1
2
7
1
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
+ See 25 more…
primary cell
hepatocyte
1
13
3
1
8
1
4
2
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
trophoblast cell
7
5
4
1
1
endothelial cell of hepatic sinusoid
4
6
6
+ See 73 more…
cell line
H1-hESC
1
8
39
1
1
2
1
HepG2
2
3
2
2
3
5
H9
7
8
1
HEK293
3
1
1
1
2
1
H7-hESC
1
2
1
1
1
+ See 31 more…
in vitro differentiated cells
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
trophoblast cell
2
2
1
ectodermal cell
2
1
1
hepatocyte
2
1
1
+ See 6 more…
stem cell
H1-hESC
1
See all biosamples
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