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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
81
candidate regulatory elements
56
target gene predictions
55
accessible chromatin
54
chromatin state
54
gene expression
28
binding sites
22
histone modifications
19
differential activity
19
variant allelic effects
15
eQTL
12
Fine-mapped variants
4
caQTL
Date released
133
September, 2022
79
February, 2021
35
September, 2023
32
February, 2024
22
March, 2020
19
January, 2020
18
May, 2020
12
June, 2020
11
August, 2021
9
November, 2021
7
February, 2020
6
May, 2021
5
January, 2022
5
October, 2022
4
August, 2017
4
February, 2023
4
March, 2023
4
November, 2019
3
April, 2020
March, 2024
2
May, 2022
2
October, 2019
1
July, 2020
1
May, 2019
1
September, 2018
Available data
265
bed bed3+
83
tsv
50
bed bed9
48
bigWig
9
bigBed bed9
3
csv
2
txt
1
bam
Organism
419
Homo sapiens
Biosample type
216
primary cell
151
tissue
43
cell line
9
in vitro differentiated cells
Organ
947
epithelium
650
kidney
465
brain
460
connective tissue
373
musculature of body
310
lung
286
intestine
277
pancreas
265
vasculature
255
heart
243
limb
217
bodily fluid
215
embryo
206
blood
203
blood vessel
202
skin of body
172
large intestine
156
liver
146
extraembryonic component
117
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
81
uterus
77
prostate gland
75
artery
73
placenta
72
adrenal gland
64
penis
64
ureter
62
lymph node
49
thymus
48
gonad
43
esophagus
43
spinal cord
33
spleen
25
nerve
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
372
AMP
35
KPMP
9
ENCODE
3
LungMap
Genome assembly (visualization)
333
hg19
136
GRCh38
2
hg18
month_released!
March, 2024
BIOSAMPLE
TYPE
419 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
differential activity
variant allelic effects
eQTL
Fine-mapped variants
caQTL
primary cell
hepatocyte
1
3
8
1
13
1
4
2
endothelial cell of umbilical vein
6
4
2
5
2
1
endothelial cell of hepatic sinusoid
6
4
6
dermis blood vessel endothelial cell
6
2
2
hepatic stellate cell
1
1
3
1
1
1
1
+ See 31 more…
tissue
liver
13
10
4
9
1
1
2
1
7
1
coronary artery
3
3
3
3
1
2
2
3
1
tibial artery
3
2
3
3
1
2
2
3
ascending aorta
4
2
1
3
1
1
1
3
aorta
4
4
4
1
+ See 7 more…
cell line
HepG2
2
3
2
2
3
5
HuH-7
1
1
1
1
1
1
ACC112
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
HuH-7.5
1
1
1
+ See 4 more…
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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