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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
220
candidate regulatory elements
217
gene expression
114
chromatin state
111
target gene predictions
78
accessible chromatin
60
differential activity
24
binding sites
24
variant allelic effects
12
eQTL
12
histone modifications
9
Fine-mapped variants
3
caQTL
Date released
312
September, 2022
238
February, 2021
140
September, 2023
29
August, 2021
29
May, 2020
24
January, 2020
21
June, 2020
16
February, 2024
16
March, 2020
14
February, 2020
6
January, 2022
6
November, 2021
5
March, 2024
4
February, 2023
4
March, 2023
4
May, 2021
4
November, 2019
4
October, 2022
2
April, 2020
2
May, 2019
2
October, 2019
1
April, 2019
1
August, 2017
Available data
468
bed bed3+
280
tsv
113
bed bed9
87
txt
59
bigWig
10
bigBed bed9
Organism
884
Homo sapiens
Biosample type
430
tissue
402
primary cell
51
cell line
1
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
460
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
736
AMP
140
KPMP
6
ENCODE
2
LungMap
Genome assembly (visualization)
591
hg19
190
GRCh38
BIOSAMPLE
TYPE
884 results
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Clear Filters
candidate regulatory elements
gene expression
chromatin state
target gene predictions
accessible chromatin
differential activity
binding sites
variant allelic effects
eQTL
histone modifications
Fine-mapped variants
caQTL
tissue
kidney
29
7
16
14
10
1
1
1
2
right kidney
20
10
10
1
1
renal cortex interstitium
20
9
9
1
1
renal pelvis
19
9
9
2
1
left kidney
18
9
9
+ See 27 more…
primary cell
epithelial cell of proximal tubule
2
16
1
1
1
1
1
glomerular endothelial cell
2
14
1
1
2
1
endothelial cell of umbilical vein
6
5
4
2
2
1
endothelial cell of hepatic sinusoid
4
6
6
glomerular visceral epithelial cell
2
5
1
1
2
+ See 79 more…
cell line
HEK293
3
1
1
1
2
1
ACHN
2
1
1
1
Caki2
2
1
1
1
RCC 7860
2
1
1
1
ACC112
2
1
1
+ See 10 more…
in vitro differentiated cells
renal cell carcinoma
1
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