Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
19
accessible chromatin
8
target gene predictions
6
candidate regulatory elements
6
gene expression
5
binding sites
5
variant allelic effects
4
chromatin state
3
histone modifications
2
caQTL
2
eQTL
Date released
16
February, 2024
15
November, 2021
10
February, 2021
9
September, 2022
3
May, 2022
3
October, 2022
1
February, 2020
1
January, 2020
1
May, 2020
1
October, 2019
Available data
50
bed bed3+
14
bigWig
4
bed bed9
1
bigBed bed9
Organism
60
Homo sapiens
Biosample type
329
tissue
60
primary cell
17
cell line
2
in vitro differentiated cells
Organ
819
epithelium
309
kidney
283
connective tissue
169
vasculature
126
pancreas
114
blood vessel
100
skin of body
63
liver
50
musculature of body
46
mammary gland
41
penis
40
extraembryonic component
35
brain
34
lung
31
heart
29
artery
23
eye
23
intestine
22
embryo
20
vein
17
lymphatic vessel
16
bronchus
14
bone element
13
bone marrow
11
adrenal gland
11
stomach
10
esophagus
10
placenta
10
prostate gland
9
blood
9
bodily fluid
6
large intestine
5
trachea
5
uterus
4
gonad
4
mouth
4
small intestine
4
spinal cord
3
thyroid gland
2
ovary
1
adipose tissue
1
limb
1
pericardium
1
testis
1
thymus
Project
45
AMP
15
ENCODE
Genome assembly (visualization)
59
hg19
20
GRCh38
BIOSAMPLE
TYPE
60 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
binding sites
variant allelic effects
chromatin state
histone modifications
caQTL
eQTL
primary cell
skeletal muscle satellite cell
5
2
2
2
2
skeletal muscle fiber
5
2
2
type I muscle cell
3
1
1
1
1
type II muscle cell
3
1
1
1
1
epithelial cell of esophagus
1
2
2
1
skeletal muscle cell
1
1
2
1
1
smooth muscle cell of the esophagus
2
2
myotube
2
1
cardiac muscle myoblast
1
1
somatic muscle myotube
1
1
aortic smooth muscle cell
1
See all biosamples
Download