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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
252
gene expression
246
candidate regulatory elements
231
accessible chromatin
202
target gene predictions
127
chromatin state
93
differential activity
50
binding sites
48
variant allelic effects
32
histone modifications
9
eQTL
6
Fine-mapped variants
4
caQTL
Date released
355
September, 2022
288
February, 2021
155
September, 2023
138
November, 2021
91
February, 2024
40
May, 2021
38
March, 2023
31
June, 2020
August, 2021
20
January, 2021
20
May, 2020
19
January, 2020
15
February, 2020
15
March, 2020
15
November, 2022
12
February, 2023
9
October, 2022
7
April, 2020
6
August, 2017
6
August, 2018
6
October, 2019
5
May, 2022
4
March, 2024
2
May, 2019
1
January, 2022
1
July, 2020
1
November, 2019
Available data
817
bed bed3+
326
tsv
184
bigWig
121
bed bed9
66
txt
14
bigBed narrowPeak
6
csv
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1300
Homo sapiens
Biosample type
846
primary cell
366
tissue
60
cell line
28
in vitro differentiated cells
Organ
926
epithelium
624
kidney
466
brain
447
connective tissue
374
musculature of body
311
lung
289
intestine
269
pancreas
265
vasculature
247
heart
244
limb
215
bodily fluid
207
embryo
205
blood
204
skin of body
203
blood vessel
174
large intestine
146
extraembryonic component
146
liver
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
978
AMP
155
KPMP
138
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
955
hg19
327
GRCh38
month_released!
August, 2021
BIOSAMPLE
TYPE
1300 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
6
14
7
2
2
1
1
2
hepatocyte
13
1
8
3
1
1
2
1
epithelial cell of proximal tubule
15
2
1
1
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
glomerular endothelial cell
13
2
2
1
1
1
+ See 146 more…
tissue
muscle of arm
33
1
16
16
1
muscle of leg
27
2
14
15
muscle of back
28
13
13
pigmented layer of retina
20
psoas muscle
7
1
8
4
+ See 38 more…
cell line
EndoC_BH1
8
8
1
3
1
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
keratinocyte
3
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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