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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
277
candidate regulatory elements
252
gene expression
235
accessible chromatin
215
target gene predictions
140
chromatin state
93
differential activity
51
variant allelic effects
50
binding sites
32
histone modifications
9
eQTL
6
Fine-mapped variants
4
caQTL
Date released
394
September, 2022
306
February, 2021
155
September, 2023
138
November, 2021
91
February, 2024
40
May, 2021
38
March, 2023
32
June, 2020
August, 2021
23
May, 2020
22
January, 2020
20
January, 2021
15
February, 2020
15
March, 2020
15
November, 2022
12
February, 2023
9
October, 2022
7
April, 2020
6
August, 2017
6
August, 2018
6
October, 2019
5
May, 2022
4
March, 2024
2
May, 2019
1
January, 2022
1
July, 2020
1
November, 2019
Available data
868
bed bed3+
326
tsv
187
bigWig
134
bed bed9
66
txt
14
bigBed narrowPeak
6
csv
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1364
Homo sapiens
Biosample type
846
primary cell
430
tissue
60
cell line
28
in vitro differentiated cells
Organ
926
epithelium
624
kidney
466
brain
449
connective tissue
374
musculature of body
311
lung
289
intestine
269
pancreas
265
vasculature
247
heart
244
limb
215
bodily fluid
207
embryo
205
blood
204
skin of body
203
blood vessel
174
large intestine
146
extraembryonic component
146
liver
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1042
AMP
155
KPMP
138
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
1019
hg19
343
GRCh38
month_released!
August, 2021
BIOSAMPLE
TYPE
1364 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
differential activity
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
6
14
7
2
2
1
1
2
hepatocyte
1
13
8
3
1
2
1
1
epithelial cell of proximal tubule
2
15
1
1
1
1
1
endothelial cell of umbilical vein
6
2
4
5
1
2
glomerular endothelial cell
2
13
2
1
1
1
+ See 146 more…
tissue
muscle of arm
33
1
16
16
1
muscle of leg
27
2
14
15
muscle of back
28
13
13
renal pelvis
19
2
9
9
1
pigmented layer of retina
20
+ See 41 more…
cell line
EndoC_BH1
8
8
1
3
1
LHCN-M2
2
1
1
1
1
1
A673
2
2
1
SJCRH30
2
1
1
1
keratinocyte
3
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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