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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
285
candidate regulatory elements
163
target gene predictions
141
chromatin state
51
accessible chromatin
20
binding sites
20
histone modifications
14
gene expression
10
eQTL
10
variant allelic effects
6
Fine-mapped variants
2
caQTL
1
differential activity
Date released
395
September, 2022
190
February, 2021
30
November, 2021
21
February, 2024
19
June, 2020
13
May, 2021
11
March, 2020
6
August, 2017
6
February, 2020
6
October, 2022
5
January, 2020
5
March, 2024
5
May, 2020
4
January, 2022
3
May, 2022
2
May, 2019
1
August, 2021
1
October, 2019
Available data
559
bed bed3+
135
bed bed9
27
bigWig
17
tsv
3
bigBed bed9
Organism
723
Homo sapiens
Biosample type
535
tissue
114
primary cell
66
cell line
8
in vitro differentiated cells
Organ
949
epithelium
652
kidney
466
brain
458
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
693
AMP
30
ENCODE
Genome assembly (visualization)
709
hg19
184
GRCh38
BIOSAMPLE
TYPE
723 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
muscle of arm
33
16
16
1
1
small intestine
29
17
15
1
1
muscle of leg
27
14
15
2
large intestine
27
14
13
1
1
muscle of back
28
13
13
+ See 37 more…
primary cell
foreskin keratinocyte
11
4
4
foreskin fibroblast
6
2
1
1
4
2
skeletal muscle satellite cell
2
2
2
5
2
skeletal muscle fiber
5
2
2
type I muscle cell
1
3
1
1
1
+ See 14 more…
cell line
HT-29
2
2
1
1
1
1
LHCN-M2
2
1
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
A673
2
2
1
+ See 10 more…
in vitro differentiated cells
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
myotube
1
1
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